This tutorial can be downloaded as part of the Wallaroo Tutorials repository.

Wallaroo Model Upload via the Wallaroo SDK: Sklearn Clustering SVM PCA

The following tutorial demonstrates how to upload a SKLearn Clustering Support Vector Machine(SVM) Principal Component Analysis (PCA) model to a Wallaroo instance.

Tutorial Goals

Demonstrate the following:

• Upload a Sklearn Clustering SVM PCA model to a Wallaroo instance.
• Create a pipeline and add the model as a pipeline step.
• Perform a sample inference.

Prerequisites

• Wallaroo Version 2023.2.1 or above instance.

References

• Wallaroo MLOps API Essentials Guide: Model Upload and Registrations
• Wallaroo API Connection Guide
• DNS Integration Guide

Tutorial Steps

Import Libraries

The first step is to import the libraries we’ll be using. These are included by default in the Wallaroo instance’s JupyterHub service.

import json
import os
import pickle

import wallaroo
from wallaroo.pipeline import Pipeline
from wallaroo.deployment_config import DeploymentConfigBuilder
from wallaroo.object import EntityNotFoundError
from wallaroo.framework import Framework

import pyarrow as pa
import numpy as np
import pandas as pd

Open a Connection to Wallaroo

The next step is connect to Wallaroo through the Wallaroo client. The Python library is included in the Wallaroo install and available through the Jupyter Hub interface provided with your Wallaroo environment.

This is accomplished using the wallaroo.Client() command, which provides a URL to grant the SDK permission to your specific Wallaroo environment. When displayed, enter the URL into a browser and confirm permissions. Store the connection into a variable that can be referenced later.

If logging into the Wallaroo instance through the internal JupyterHub service, use wl = wallaroo.Client(). For more details on logging in through Wallaroo, see the Wallaroo SDK Essentials Guide: Client Connection.

wl = wallaroo.Client(request_timeout=600)

Set Variables

We’ll set the name of our workspace, pipeline, models and files. Workspace names must be unique across the Wallaroo workspace. For this, we’ll add in a randomly generated 4 characters to the workspace name to prevent collisions with other users’ workspaces. If running this tutorial, we recommend hard coding the workspace name so it will function in the same workspace each time it’s run.

workspace_name = f'sklearn-clustering-svm-pca'
pipeline_name = f'sklearn-clustering-svm-pca'

model_name = 'sklearn-clustering-svm-pca'
model_file_name = 'models/model-auto-conversion_sklearn_svm_pca_pipeline.pkl'

Create Workspace and Pipeline

We will now create the Wallaroo workspace to store our model and set it as the current workspace. Future commands will default to this workspace for pipeline creation, model uploads, etc. We’ll create our Wallaroo pipeline to deploy our model.

workspace = wl.get_workspace(name=workspace_name, create_if_not_exist=True)

wl.set_current_workspace(workspace)

pipeline = wl.build_pipeline(pipeline_name)

Configure Data Schemas

SKLearn models are uploaded to Wallaroo through the Wallaroo Client upload_model method.

Upload SKLearn Model Parameters

The following parameters are required for SKLearn models. Note that while some fields are considered as optional for the upload_model method, they are required for proper uploading of a SKLearn model to Wallaroo.

Once the upload process starts, the model is containerized by the Wallaroo instance. This process may take up to 10 minutes.

input_schema = pa.schema([
    pa.field('inputs', pa.list_(pa.float64(), list_size=4))
])

output_schema = pa.schema([
    pa.field('predictions', pa.int32())
])

Upload Model

The model will be uploaded with the framework set as Framework.SKLEARN.

model = wl.upload_model(model_name, 
                        model_file_name, 
                        framework=Framework.SKLEARN, 
                        input_schema=input_schema, 
                        output_schema=output_schema)
model

Waiting for model loading - this will take up to 10.0min.
Model is pending loading to a native runtime..
Model is attempting loading to a native runtime..incompatible

Model is pending loading to a container runtime...
Model is attempting loading to a container runtime....successful

Ready

model.config().runtime()

'flight'

Deploy Pipeline

The model is uploaded and ready for use. We’ll add it as a step in our pipeline, then deploy the pipeline. For this example we’re allocated 0.25 cpu and 4 Gi RAM to the pipeline through the pipeline’s deployment configuration.

deployment_config = DeploymentConfigBuilder() \
    .cpus(0.25).memory('1Gi') \
    .build()

# clear the pipeline if it was used before
pipeline.undeploy()
pipeline.clear()

pipeline.add_model_step(model)

pipeline.deploy(deployment_config=deployment_config)

Waiting for deployment - this will take up to 600s .............. ok

Inference

SKLearn models must have all of the data as one line to prevent columns from being read out of order when submitting in JSON. The following will take in the data, convert the rows into a single inputs for the table, then perform the inference. From the output_schema we have defined the output as predictions which will be displayed in our inference result output as out.predictions.

data = pd.read_json('data/test-sklearn-kmeans.json')
display(data)

# move the column values to a single array input
dataframe = pd.DataFrame({"inputs": data[:2].values.tolist()})
display(dataframe)

pipeline.infer(dataframe)

Undeploy Pipelines

With the tutorial complete, the pipeline is undeployed to return the resources back to the cluster.

pipeline.undeploy()

Waiting for undeployment - this will take up to 600s ..................................... ok