wallaroo.inference_decode

def convert_to_np_dtype(dtype):

def to_nd_array_list(outputs: List[Dict[str, Any]]) -> List[numpy.ndarray]:

def decode_inference_result(entry: Dict[str, Any]) -> List[Dict[str, Any]]:

Decode inference results. Since they have a potentially rich structure, this could become a substantial effort in the future.

TODO: Support multiple outputs TODO: Support multiple data types

def flatten_tensor(prefix: str, numeric_list: list) -> Dict[str, numbers.Number]:

Converts a possibly multidimentionsl list of numbers into a dict where each item in the list is represented by a key value pair in the dict. Does not maintain dimensions since dataframes are 2d. Does not maintain/manage types since it should work for any type supported by numpy.

For example [1,2,3] => {prefix_0: 1, prefix_1: 2, prefix_2: 3}. [[1,2],[3,4]] => {prefix_0_0: 1, prefix_0_1: 2, prefix_1_0: 3, prefix_1_1: 4}

def flatten_dict(prefix: str, input_dict: Dict) -> Dict[str, Any]:

Recursively flattens the input dict, setting the values on the output dict. Assumes simple value types (str, numbers, dicts, and lists). If a value is a dict it is flattened recursively. If a value is a list each item is set as a new k, v pair.

def inference_logs_to_dataframe(logs: List[Dict[str, Any]]) -> pandas.core.frame.DataFrame:

Very similar to dict_list_to_dataframe but specific to inference logs since they have input and output heiararchical fields/structures that must be treated in particular ways.

def nested_df_to_flattened_df(orig: pandas.core.frame.DataFrame) -> pandas.core.frame.DataFrame:

def dict_list_to_dataframe(assay_results: List[Dict[str, Any]]) -> pandas.core.frame.DataFrame:

Primarily for assay result lists but can be used for any list of simple dicts.